Posted 5 days ago

Principle Scientific Software Engineer | Kumar Lab

The Jackson Laboratory United States of America, Bar Harbor, Maine
Onsite Full Time
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Job description

As a Principal Scientific Software Engineer, you will play a pivotal role in leading the development of cutting-edge machine vision software applications and systems to support research science. This position may work closely with scientists across JAX and/or external investigators. The incumbent will be at the forefront of designing, implementing, and deploying high-quality solutions. This role will also collaborate with technical team leads for daily work assignments. This role demands a highly skilled software engineer comfortable in an agile environment, with a commitment to continuous learning in a rapidly evolving technology landscape. The role in The Kumar Lab will create behavior annotation software on the Envision platform. The successful candidate will be able to work with multiple internal and external stakeholders, meet timelines, and deliver high-quality software products. What You’ll Contribute Lead the implementation of high-quality projects from high-level aims to execution with minimal supervision from project sponsors/PIs. Drive the publication of applications resulting from these projects. Lead or co-lead efforts to identify new bioinformatics applications and technologies. Focus on obtaining approvals and funding for impactful projects. Stay updated on emerging technologies, and evaluating their integration into our workflow. Provide mentorship to Scientific Software Engineers (SSEs) and offer technical leadership to the team. Actively contribute to the technical growth and development of team members. What You’re Good At Minimum of 10-15 years of experience with a BS or higher degree in computer science or bioinformatics. Significant prior work experience in scientific research software development is considered. Master's or PhD preferred, in computer science or related field Ability and desire to work closely on a team, sharing responsibilities for code implementation, design decisions and architectural choices in a fast-paced development cycle. Excellent oral and written communication skills are a must. Ability to convey complex technical concepts to both technical and non-technical stakeholders. Background in biological sciences, or a strong eagerness to learn and delve into these scientific domains. Working familiarity with technologies such as Python, JavaScript, HTML5, JSON, Java, MySQL, PostgreSQL, Flask, Go, SLURM, BASH and web services. Specialized expertise in web and user interface design and development. Extensive knowledge of a broad range of software engineering methodologies, technologies, and scientific applications, particularly in genomics and bioinformatics. Drive the discovery and integration of new technologies, languages, frameworks, and programming techniques. Evaluate and deploy improvements to team infrastructure, including project tracking systems, source repository integration, and automated build & deployment infrastructure. Stay abreast of scientific developments, faculty research, and industry trends relevant to the work. Develop innovative ideas for applications that meet evolving research needs. Represent the institution as a senior technical voice, within the institution and externally showcasing expertise and contributing to the overall technical vision. The salary range is $121,924 - $176,790. Salary will be determined based on qualifications and relevant years of experience. About JAX: The Jackson Laboratory is an independent, nonprofit biomedical research institution with a National Cancer Institute-designated Cancer Center and nearly 3,000 employees in locations across the United States (Maine, Connecticut, California), Japan and China. Its mission is to discover precise genomic solutions for disease and empower the global biomedical community in the shared quest to improve human health. Founded in 1929, JAX applies over nine decades of expertise in genetics to increase understanding of human disease, advancing treatments and cures for cancer, neurological and immune disorders, diabetes, aging and heart disease. It models and interprets genomic complexity, integrates basic research with clinical application, educates current and future scientists, and provides critical data, tools and services to the global biomedical community. For more information, please visit www.jax.org. EEO Statement: The Jackson Laboratory provides equal employment opportunities to all employees and applicants for employment in all job classifications without regard to race, color, religion, age, mental disability, physical disability, medical condition, gender, sexual orientation, genetic information, ancestry, marital status, national origin, veteran status, and other classifications protected by applicable state and local non-discrimination laws. Bar Harbor: The Jackson Laboratory's 43-acre scenic Bar Harbor campus is nestled between the Gulf of Maine and the mountains of Acadia National Park. Some of the best hiking and biking in the world (over 50 square miles of mountains, lakes, views, and dramatic coastline) is accessible from our campus. We are one mile from downtown Bar Harbor, which offers a vibrant downtown district with a plethora of restaurants, shops, museums, and galleries. Ellsworth: The Charles E. Hewett Center in Ellsworth, Maine, is a state-of-the-art facility that serves researchers world wide. The facility represents the culmination of nine decades of unmatched experience and leadership in breeding and caring for laboratory mice. Ellsworth, Maine, is one of Maine’s fastest growing cities. With a growth rate of nearly 20%, Ellsworth is a bustling year-round community and acts as a hub for surrounding towns. It is located nearby Acadia National Park and hosts numerous special events, concerts and festivals each year. Residents have access to fabulous shopping, recreation, museums, galleries, and dining at a variety of independent restaurants. Farmington: JAX Genomic Medicine is transforming medicine by improving patient care, lowering costs, and increasing life span and health span. JAX Genomic Medicine’s research focuses on the complex genetic causes of disease and on the development of genomic solutions tailored to each person's unique genetic makeup. JAX Genomic Medicine sits on a 17-acre site on the campus of the University of Connecticut Health Center. The 183,500-square-foot facility opened in the fall of 2014. Now, it houses over 300 biomedical researchers, technicians, and support staff in state-of-the-art computing facilities and laboratories. In Connecticut, JAX resides in the scenic town of Farmington, in the state’s capitol region. The Hartford region, which offers some of the best public schools in the country, is made up of both bigger cities and smaller, charming historic New England towns. JAX Genomic Medicine is also geographically located within 2 hours of Boston and New York and is close to multiple transportation systems, including bus lines, highways, railroads and international airports. Sacramento: The JAX® Mice, Clinical and Research Services facility is located in Sacramento, the state capital of California. Sacramento is less than a two-hour drive from San Francisco, Napa Valley, and scenic Lake Tahoe, and a short flight to both Los Angeles and Orange County. Sacramento is the birthplace of the nation’s Farm to Fork movement, and offers excellent restaurants, gastro-pubs, wineries, theaters, and museums. Outdoor activities are plentiful: Boating, white water rafting, and riding the scenic bicycle trails are popular. Housing and other costs of living are more affordable in Sacramento and its surrounding suburbs than in most other neighboring areas in the North Bay, making Sacramento one of the hottest housing markets in the country year after year. Augusta: JAX’s Maine Cancer Genomics Initiative (MCGI) is located in Augusta, Maine, in the Harold Alfond Center for Cancer Care (HACCC), at Maine General Hospital. It began operations in 2016 with three overarching goals: to provide cancer genomic testing for Maine cancer patients; to develop and deliver physician education about clinical genomic cancer diagnostics; and to build a network in Maine of oncology practices conducting studies in genomic medicine.

Skills and functions

  • Javascript
  • Python
  • Software Engineering